Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MARCHF5Membrane associated ring-CH-type finger 5. (278 aa)    
Predicted Functional Partners:
ENSVPAP00000002582
annotation not available
    
 
 0.989
MFN1
Mitofusin 1.
    
 
 0.981
TOMM70
Translocase of outer mitochondrial membrane 70.
    
 0.978
DNM1L
Dynamin 1 like.
    
 
 0.974
UBE2D1
Ubiquitin conjugating enzyme E2 D1.
   
 
 0.965
ENSVPAP00000001408
annotation not available
   
   0.946
RHOT1
Ras homolog family member T1.
    
 0.923
ENSVPAP00000006036
annotation not available
    
 0.918
RPS27A
Ribosomal protein S27a.
    
  0.912
UBE2D3
Ubiquitin conjugating enzyme E2 D3.
   
 
 0.836
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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