STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000001993annotation not available (519 aa)    
Predicted Functional Partners:
ATP2B4
ATPase plasma membrane Ca2+ transporting 4.
 
 
 0.826
ENSVPAP00000004572
annotation not available
 
 
 0.765
PLN
Phospholamban.
   
 0.743
TMEM165
Transmembrane protein 165.
  
 
 0.728
ATP1B3
ATPase Na+/K+ transporting subunit beta 3.
    
 0.661
ATP1B4
ATPase Na+/K+ transporting family member beta 4.
    
 0.658
SOD1
Superoxide dismutase 1.
   
 
 0.656
ENSVPAP00000005101
annotation not available
  
 
0.648
ENSVPAP00000001555
annotation not available
   
 0.634
ETHE1
ETHE1 persulfide dioxygenase.
  
  
 0.620
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.