STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DTX3LDeltex E3 ubiquitin ligase 3L. (640 aa)    
Predicted Functional Partners:
PARP9
poly(ADP-ribose) polymerase family member 9.
   
 
 0.923
ENSVPAP00000009542
annotation not available
    
 0.804
ENSVPAP00000003661
annotation not available
    
  0.795
ENSVPAP00000005509
annotation not available
    
 0.789
RNF38
Ring finger protein 38.
    
 
 0.751
PARP14
poly(ADP-ribose) polymerase family member 14.
   
 
 0.741
SYAP1
Synapse associated protein 1.
      
 0.719
ENSVPAP00000005510
annotation not available
    
 0.719
IRF1
Interferon regulatory factor 1.
   
 0.691
ENSVPAP00000005552
annotation not available
    
 0.671
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.