Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NMIN-myc and STAT interactor. (309 aa)    
Predicted Functional Partners:
IFI35
Interferon induced protein 35.
   
 
 0.993
MRPS35
Mitochondrial ribosomal protein S35.
    
   0.840
ASRGL1
Asparaginase and isoaspartyl peptidase 1.
    
   0.780
BRMS1L
BRMS1 like transcriptional repressor.
    
   0.776
RPL27
Ribosomal protein L27.
   
   0.734
TNPO3
Transportin 3.
      
 0.689
MYC
MYC proto-oncogene, bHLH transcription factor.
    
 
 0.638
PHF11
PHD finger protein 11.
   
  
 0.638
TRIM21
Tripartite motif containing 21.
   
 
 0.572
TRIM58
Tripartite motif containing 58.
   
 
 0.566
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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