Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC49A4Solute carrier family 49 member 4. (362 aa)    
Predicted Functional Partners:
CCDC150
Coiled-coil domain containing 150.
      
 0.761
IQCK
IQ motif containing K.
      
 0.675
KLHL23
Kelch like family member 23.
      
 0.611
FITM2
Fat storage inducing transmembrane protein 2.
      
 0.589
SLC15A2
Solute carrier family 15 member 2.
    
 
 0.554
ENSVPAP00000008825
annotation not available
      
 0.526
HSPBAP1
HSPB1 associated protein 1.
      
 0.525
ZNF385B
Zinc finger protein 385B.
      
 0.523
PPP4R2
Protein phosphatase 4 regulatory subunit 2.
      
 0.521
ARAP2
ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2.
      
 0.515
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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