Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CALHM5Calcium homeostasis modulator family member 5. (309 aa)    
Predicted Functional Partners:
ENSVPAP00000001711
annotation not available
   
    0.649
ENSVPAP00000006653
annotation not available
   
    0.649
ENSVPAP00000004810
annotation not available
   
    0.648
CWC25
CWC25 spliceosome associated protein homolog.
   
    0.648
NT5DC1
5'-nucleotidase domain containing 1.
      
 0.608
VCL
Vinculin.
      
 0.599
ERC2
ELKS/RAB6-interacting/CAST family member 2.
      
 0.592
MOCS3
Molybdenum cofactor synthesis 3.
   
    0.587
HAND2
Heart and neural crest derivatives expressed 2.
      
 0.521
FBXO47
F-box protein 47.
   
    0.517
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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