Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CALHM4Calcium homeostasis modulator family member 4. (313 aa)    
Predicted Functional Partners:
ENSVPAP00000006653
annotation not available
   
    0.807
ZNF699
Zinc finger protein 699.
   
    0.807
ENSVPAP00000001711
annotation not available
   
    0.806
SLCO1A2
Solute carrier organic anion transporter family member 1A2.
   
    0.806
LIX1
Limb and CNS expressed 1.
   
    0.804
ENSVPAP00000004810
annotation not available
   
    0.804
ENSVPAP00000008643
annotation not available
   
    0.804
CWC25
CWC25 spliceosome associated protein homolog.
   
    0.803
ENSVPAP00000006559
annotation not available
   
    0.802
ENSVPAP00000010954
annotation not available
   
    0.800
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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