Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSPH4ARadial spoke head component 4A. (723 aa)    
Predicted Functional Partners:
RSPH3
Radial spoke head 3.
   
 
 0.966
RSPH1
Radial spoke head component 1.
   
 
 0.962
RANBP2
RAN binding protein 2.
    
 0.958
ENSVPAP00000003396
annotation not available
   
 
 0.931
ENSVPAP00000010321
annotation not available
   
 
 0.921
ENSVPAP00000003126
annotation not available
   
 
 0.916
DNAI2
Dynein axonemal intermediate chain 2.
   
 
 0.914
ENSVPAP00000007804
annotation not available
   
 
 0.912
ENSVPAP00000000456
annotation not available
   
 
 0.908
NME5
NME/NM23 family member 5.
   
 
 0.907
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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