Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KPNA5Karyopherin subunit alpha 5. (582 aa)    
Predicted Functional Partners:
KPNB1
Karyopherin subunit beta 1.
   
 0.985
KPNA1
Karyopherin subunit alpha 1.
   
  0.953
NUP50
Nucleoporin 50.
   
 
 0.877
ENSVPAP00000007452
annotation not available
    
   0.861
ANP32B
Acidic nuclear phosphoprotein 32 family member B.
    
 
 0.856
CSE1L
Chromosome segregation 1 like.
   
 
 0.805
KBTBD4
Kelch repeat and BTB domain containing 4.
    
   0.779
RCC1
Regulator of chromosome condensation 1.
   
 
 0.714
RANBP2
RAN binding protein 2.
   
 
 0.703
ALS2
Alsin Rho guanine nucleotide exchange factor ALS2.
   
 
 0.680
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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