Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000002035annotation not available (48 aa)    
Predicted Functional Partners:
UBLCP1
Ubiquitin like domain containing CTD phosphatase 1.
   
 0.707
CTDSPL
CTD small phosphatase like.
    
 0.700
CTDSPL2
CTD small phosphatase like 2.
    
 0.700
ENSVPAP00000008305
annotation not available
     
 0.689
WAC
WW domain containing adaptor with coiled-coil.
      
 0.673
BRINP1
BMP/retinoic acid inducible neural specific 1.
      
 0.663
LPIN2
Lipin 2.
     
 0.623
ENSVPAP00000006380
annotation not available
     
 0.623
ENSVPAP00000000722
annotation not available
      
 0.608
ACSM1
acyl-CoA synthetase medium chain family member 1.
      
 0.601
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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