Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000002047annotation not available (679 aa)    
Predicted Functional Partners:
CUL3
Cullin 3.
    
 0.733
CKAP5
Cytoskeleton associated protein 5.
    
 
 0.714
RELL1
RELT like 1.
      
 0.691
ATP8B4
ATPase phospholipid transporting 8B4 (putative).
      
 0.666
MRPL47
Mitochondrial ribosomal protein L47.
      
 0.665
OTOA
Otoancorin.
      
 0.664
ITFG1
Integrin alpha FG-GAP repeat containing 1.
      
 0.662
RIC8B
RIC8 guanine nucleotide exchange factor B.
      
 0.659
UBXN7
UBX domain protein 7.
    
 0.635
NUAK1
NUAK family kinase 1.
    
 
 0.622
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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