Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FOXR1Forkhead box R1. (291 aa)    
Predicted Functional Partners:
BRD8
Bromodomain containing 8.
    
  0.928
ENSVPAP00000003919
annotation not available
    
 
 0.925
MYC
MYC proto-oncogene, bHLH transcription factor.
    
 
 0.925
EPC1
Enhancer of polycomb homolog 1.
    
   0.924
MEAF6
MYST/Esa1 associated factor 6.
    
   0.924
ING3
Inhibitor of growth family member 3.
    
   0.924
ENSVPAP00000003789
annotation not available
    
   0.924
EPC2
Enhancer of polycomb homolog 2.
    
   0.924
ENSVPAP00000007248
annotation not available
    
   0.924
YEATS4
YEATS domain containing 4.
    
   0.924
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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