Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000002068annotation not available (402 aa)    
Predicted Functional Partners:
BCAT1
Branched chain amino acid transaminase 1.
  
 0.919
HAO2
Hydroxyacid oxidase 2.
  
 
 0.821
ASNS
Asparagine synthetase (glutamine-hydrolyzing).
  
 
 0.819
SHE
Src homology 2 domain containing E.
      
 0.815
FH
Fumarate hydratase.
    
  0.759
ENSVPAP00000010629
annotation not available
  
 
 0.755
THNSL1
Threonine synthase like 1.
  
 
  0.731
THNSL2
Threonine synthase like 2.
  
 
  0.731
AASDH
Aminoadipate-semialdehyde dehydrogenase.
  
  
 0.717
QDPR
Quinoid dihydropteridine reductase.
     
 0.692
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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