Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000002082annotation not available (736 aa)    
Predicted Functional Partners:
ENSVPAP00000003253
annotation not available
    
 
 0.997
RAP1B
RAP1B, member of RAS oncogene family.
    
 0.978
RAP1A
RAP1A, member of RAS oncogene family.
    
 0.978
ENSVPAP00000004728
annotation not available
    
 
 0.957
ENSVPAP00000009290
annotation not available
    
 
 0.938
PDCD10
Programmed cell death 10.
    
 
 0.928
TLN2
Talin 2.
    
 
 0.925
ENSVPAP00000004727
annotation not available
    
 
 0.854
PPP4R2
Protein phosphatase 4 regulatory subunit 2.
    
   0.795
THBS1
Thrombospondin 1.
    
 
 0.718
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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