Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ANKIB1Ankyrin repeat and IBR domain containing 1. (1120 aa)    
Predicted Functional Partners:
RNF216
Ring finger protein 216.
    
 0.815
ENSVPAP00000009542
annotation not available
    
 0.778
ZFAND4
Zinc finger AN1-type containing 4.
    
 0.731
ENSVPAP00000004568
annotation not available
      
 0.713
RNF7
Ring finger protein 7.
    
 0.697
BIRC6
Baculoviral IAP repeat containing 6.
    
 0.646
ENSVPAP00000001119
annotation not available
    
 
 0.623
RPS27A
Ribosomal protein S27a.
    
  0.593
UBD
Ubiquitin D.
    
 0.570
FAU
FAU ubiquitin like and ribosomal protein S30 fusion.
    
 0.570
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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