Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GNGT1G protein subunit gamma transducin 1. (74 aa)    
Predicted Functional Partners:
GNAI1
G protein subunit alpha i1.
   
 0.989
GNAI3
G protein subunit alpha i3.
   
 0.989
GNAT2
G protein subunit alpha transducin 2.
   
 0.987
GNB5
G protein subunit beta 5.
    
 0.980
GNA13
G protein subunit alpha 13.
   
 0.976
GNG4
G protein subunit gamma 4.
    
 0.975
GNG12
G protein subunit gamma 12.
    
0.968
PDE6A
Phosphodiesterase 6A.
   
 
 0.968
RHO
Rhodopsin.
   
 0.965
GNG3
G protein subunit gamma 3.
     
 0.963
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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