Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
BET1Bet1 golgi vesicular membrane trafficking protein. (123 aa)    
Predicted Functional Partners:
GOSR1
Golgi SNAP receptor complex member 1.
    
 0.999
ENSVPAP00000008653
annotation not available
   
 0.999
STX5
Syntaxin 5.
   
 0.999
SCFD1
Sec1 family domain containing 1.
   
 0.998
YKT6
YKT6 v-SNARE homolog.
   
 0.997
USO1
USO1 vesicle transport factor.
   
 0.993
NSF
N-ethylmaleimide sensitive factor, vesicle fusing ATPase.
    
 0.986
ENSVPAP00000000887
annotation not available
   
 0.981
ENSVPAP00000009374
annotation not available
   
 
 0.979
SEC22C
SEC22 homolog C, vesicle trafficking protein.
   
 0.978
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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