STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NONOnon-POU domain containing octamer binding. (470 aa)    
Predicted Functional Partners:
ENSVPAP00000006470
annotation not available
  
   
0.847
FUS
FUS RNA binding protein.
   
 
 0.833
PSPC1
Paraspeckle component 1.
      
0.813
ENSVPAP00000005880
annotation not available
   
 
 0.802
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 
 0.783
NUDT21
Nudix hydrolase 21.
   
 
 0.761
PRCC
Proline rich mitotic checkpoint control factor.
      
 0.724
HNRNPA2B1
Heterogeneous nuclear ribonucleoprotein A2/B1.
   
 
 0.666
DDX5
DEAD-box helicase 5.
   
 
 0.658
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
   
 
 0.641
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.