Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM258Transmembrane protein 258. (78 aa)    
Predicted Functional Partners:
KRTCAP2
Keratinocyte associated protein 2.
   
 0.999
DAD1
Defender against cell death 1.
   
 0.999
RPN2
Ribophorin II.
   
 0.998
STT3A
STT3 oligosaccharyltransferase complex catalytic subunit A.
   
 0.998
MAGT1
Magnesium transporter 1.
    
 0.996
TUSC3
Tumor suppressor candidate 3.
    
 0.992
STT3B
STT3 oligosaccharyltransferase complex catalytic subunit B.
   
 0.991
ENSVPAP00000005526
annotation not available
   
 0.991
SEC61B
SEC61 translocon beta subunit.
   
   0.955
SSR2
Signal sequence receptor subunit 2.
   
 
 0.911
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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