Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000002177annotation not available (384 aa)    
Predicted Functional Partners:
NUP153
Nucleoporin 153.
   
 0.851
NUP107
Nucleoporin 107.
    
 0.823
NUP205
Nucleoporin 205.
   
 0.800
NUP93
Nucleoporin 93.
   
 0.771
RAE1
Ribonucleic acid export 1.
    
 0.771
RANBP2
RAN binding protein 2.
   
 0.769
NUP133
Nucleoporin 133.
   
 0.764
SEH1L
SEH1 like nucleoporin.
    
 0.757
NUP85
Nucleoporin 85.
    
 0.750
NUP214
Nucleoporin 214.
   
 0.741
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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