Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PTPRMProtein tyrosine phosphatase receptor type M. (1383 aa)    
Predicted Functional Partners:
FRAS1
Fraser extracellular matrix complex subunit 1.
   
 
 0.660
ADCY2
Adenylate cyclase 2.
    
 
 0.648
ENSVPAP00000004962
annotation not available
    
 
 0.645
ENSVPAP00000001778
annotation not available
    
 0.641
ENSVPAP00000002129
annotation not available
    
 
 0.636
ENSVPAP00000006063
annotation not available
   
   0.634
SKAP2
Src kinase associated phosphoprotein 2.
    
 
 0.628
ENSVPAP00000009575
annotation not available
    
 
 0.622
ENSVPAP00000003170
annotation not available
      
 0.612
ENSVPAP00000007386
annotation not available
      
 0.605
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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