Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
WDR7WD repeat domain 7. (1420 aa)    
Predicted Functional Partners:
DMXL2
Dmx like 2.
   
 
 0.992
ATP6V1G1
ATPase H+ transporting V1 subunit G1.
    
 
 0.968
ENSVPAP00000003458
ATP6V1G2-DDX39B readthrough (NMD candidate).
    
 
 0.965
DMXL1
Dmx like 1.
   
 
 0.951
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.950
RAB3GAP1
RAB3 GTPase activating protein catalytic subunit 1.
    
 
 0.931
ATP6V1H
ATPase H+ transporting V1 subunit H.
    
 
 0.927
ATP6V1C1
ATPase H+ transporting V1 subunit C1.
    
 
 0.921
ATP6V1B1
ATPase H+ transporting V1 subunit B1.
    
 
 0.894
ATP6V1B2
ATPase H+ transporting V1 subunit B2.
    
 
 0.892
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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