Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRMT6tRNA methyltransferase 6. (502 aa)    
Predicted Functional Partners:
TRMT61B
tRNA methyltransferase 61B.
   
 0.994
METTL1
Methyltransferase like 1.
   
 
 0.958
ENSVPAP00000008967
annotation not available
   
  
 0.896
WDR12
WD repeat domain 12.
   
    0.870
SRP9
Signal recognition particle 9.
    
   0.843
ENSVPAP00000000127
annotation not available
   
   0.842
TRMT11
tRNA methyltransferase 11 homolog.
   
 0.840
WDR74
WD repeat domain 74.
   
    0.834
TRMT1L
tRNA methyltransferase 1 like.
   
  
 0.833
ENSVPAP00000003915
annotation not available
   
   0.829
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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