Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SYT16Synaptotagmin 16. (531 aa)    
Predicted Functional Partners:
ENSVPAP00000001522
annotation not available
    
 0.716
ITSN2
Intersectin 2.
     
 0.669
ENSVPAP00000004429
annotation not available
    
 0.659
ENSVPAP00000008256
annotation not available
    
 0.659
C3orf67
Chromosome 3 open reading frame 67.
      
 0.608
RIMS2
Regulating synaptic membrane exocytosis 2.
     
 0.595
STON2
Stonin 2.
   
 0.585
STX11
Syntaxin 11.
    
 0.578
RABAC1
Rab acceptor 1.
    
   0.575
GTF2A1L
General transcription factor IIA subunit 1 like.
    
 0.562
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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