Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000002247annotation not available (641 aa)    
Predicted Functional Partners:
PQBP1
Polyglutamine binding protein 1.
    
 0.999
CTNNBL1
Catenin beta like 1.
    
 0.994
CWC15
CWC15 spliceosome associated protein homolog.
   
 0.990
CDC5L
Cell division cycle 5 like.
   
 0.990
PLRG1
Pleiotropic regulator 1.
    
 0.989
DDX5
DEAD-box helicase 5.
    
  0.974
CDC40
Cell division cycle 40.
   
 0.972
DDX17
DEAD-box helicase 17.
    
  0.962
SMU1
SMU1 DNA replication regulator and spliceosomal factor.
    
 0.956
TCERG1
Transcription elongation regulator 1.
   
 0.955
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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