Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MGPMatrix Gla protein. (103 aa)    
Predicted Functional Partners:
GGCX
Gamma-glutamyl carboxylase.
    
 
 0.945
VCL
Vinculin.
      
 0.767
ENSVPAP00000004089
annotation not available
   
  
 0.764
SMPX
Small muscle protein X-linked.
      
 0.743
ENSVPAP00000003591
annotation not available
      
 0.714
MFAP5
Microfibril associated protein 5.
   
  
 0.703
ENSVPAP00000008180
annotation not available
   
  
 0.695
SPP1
Secreted phosphoprotein 1.
   
  
 0.695
DMP1
Dentin matrix acidic phosphoprotein 1.
      
 0.685
DCN
Decorin.
   
  
 0.680
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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