Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ERP27Endoplasmic reticulum protein 27. (227 aa)    
Predicted Functional Partners:
ENSVPAP00000001248
annotation not available
    
 
 0.871
PDIA3
Protein disulfide isomerase family A member 3.
   
 0.857
ENSVPAP00000001621
annotation not available
   
 
 0.798
PDE6H
Phosphodiesterase 6H.
      
 0.765
CREBRF
CREB3 regulatory factor.
    
 
 0.753
ENSVPAP00000010444
annotation not available
   
 0.737
ENSVPAP00000007453
annotation not available
   
 0.733
ENSVPAP00000009793
annotation not available
      
 0.733
FOXA1
Forkhead box A1.
    
 
 0.707
ENSVPAP00000004202
annotation not available
    
 
 0.699
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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