Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PFDN1Prefoldin subunit 1. (95 aa)    
Predicted Functional Partners:
PFDN5
Prefoldin subunit 5.
   
 0.999
PFDN2
Prefoldin subunit 2.
   
 0.998
VBP1
VHL binding protein 1.
   
 0.998
CCT3
Chaperonin containing TCP1 subunit 3.
   
 0.948
TCP1
T-complex 1.
   
 0.918
CCT4
Chaperonin containing TCP1 subunit 4.
   
 0.869
CCT2
Chaperonin containing TCP1 subunit 2.
   
 0.866
CCT7
Chaperonin containing TCP1 subunit 7.
   
  0.855
PDCD5
Programmed cell death 5.
   
    0.833
DCAF5
DDB1 and CUL4 associated factor 5.
    
   0.828
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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