Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
IKIK cytokine. (449 aa)    
Predicted Functional Partners:
SMU1
SMU1 DNA replication regulator and spliceosomal factor.
   
 0.997
MFAP1
Microfibril associated protein 1.
   
 0.988
ENSVPAP00000004197
annotation not available
    
  0.970
EFTUD2
Elongation factor Tu GTP binding domain containing 2.
    
 
 0.965
TCERG1
Transcription elongation regulator 1.
   
  0.955
FRA10AC1
FRA10A associated CGG repeat 1.
   
   0.955
ENSVPAP00000002247
annotation not available
   
  0.954
CDC40
Cell division cycle 40.
   
  0.953
WBP4
WW domain binding protein 4.
    
  0.950
ZMAT2
Zinc finger matrin-type 2.
    
  0.950
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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