Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PCDHB15Protocadherin beta 15. (676 aa)    
Predicted Functional Partners:
ADGRL2
Adhesion G protein-coupled receptor L2.
    
 
 0.693
SLC35G1
Solute carrier family 35 member G1.
      
 0.682
CTNNA3
Catenin alpha 3.
    
 0.626
ENSVPAP00000002254
annotation not available
      
 0.615
USH2A
Usherin.
      
 0.612
GUCA1C
Guanylate cyclase activator 1C.
      
 0.609
CACNA1E
Calcium voltage-gated channel subunit alpha1 E.
      
 0.524
ENSVPAP00000008260
annotation not available
   
 
 0.523
ENSVPAP00000010713
annotation not available
      
 0.519
MYO9A
Myosin IXA.
    
 0.514
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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