Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PCDHGA8Protocadherin gamma subfamily A, 8. (807 aa)    
Predicted Functional Partners:
MYO9A
Myosin IXA.
    
 0.514
ENSVPAP00000010021
annotation not available
    
 0.498
UCK2
Uridine-cytidine kinase 2.
    
 0.482
CTNNB1
Catenin beta 1.
    
 0.482
PKP4
Plakophilin 4.
    
 0.466
CTNND2
Catenin delta 2.
    
 0.466
PKP2
Plakophilin 2.
    
 0.459
CTNNAL1
Catenin alpha like 1.
    
 0.454
CTNND1
Catenin delta 1.
    
  0.448
CTNNA2
Catenin alpha 2.
    
 0.448
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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