STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OSBPL9Oxysterol binding protein like 9. (702 aa)    
Predicted Functional Partners:
VAPB
VAMP associated protein B and C.
   
 
 0.988
OSBPL11
Oxysterol binding protein like 11.
   
   0.934
ENSVPAP00000001198
annotation not available
    
   0.784
DNAJA4
DnaJ heat shock protein family (Hsp40) member A4.
    
   0.784
GFM2
G elongation factor mitochondrial 2.
      
 0.747
WDR44
WD repeat domain 44.
    
 
 0.737
ENSVPAP00000004296
annotation not available
   
 
 0.724
STXBP5
Syntaxin binding protein 5.
      
 0.687
GALNTL6
Polypeptide N-acetylgalactosaminyltransferase like 6.
      
 0.686
IFRD1
Interferon related developmental regulator 1.
      
 0.675
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.