Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC8A1Solute carrier family 8 member A1. (772 aa)    
Predicted Functional Partners:
SLC8A3
Solute carrier family 8 member A3.
  
  
 
0.902
PRKACB
Protein kinase cAMP-activated catalytic subunit beta.
   
 
 0.901
PRKG1
Protein kinase cGMP-dependent 1.
     
  0.900
PRKG2
Protein kinase cGMP-dependent 2.
     
  0.900
ATP2A2
ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2.
   
 
 0.664
ENSVPAP00000009024
annotation not available
    
 
 0.624
CACNA2D1
Calcium voltage-gated channel auxiliary subunit alpha2delta 1.
   
 
 0.606
ENSVPAP00000007712
annotation not available
     
  0.596
RYR2
Ryanodine receptor 2.
   
  
 0.595
ENSVPAP00000011079
annotation not available
   
  
 0.547
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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