Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000002321annotation not available (228 aa)    
Predicted Functional Partners:
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
   
 0.901
ENSVPAP00000000769
annotation not available
   
 
 0.883
MAGI3
Membrane associated guanylate kinase, WW and PDZ domain containing 3.
   
 0.872
CASK
Calcium/calmodulin dependent serine protein kinase.
   
 0.789
ENSVPAP00000003396
annotation not available
  
 
 0.683
ENSVPAP00000002667
annotation not available
      
 0.674
TNNT1
Troponin T1, slow skeletal type.
   
 0.660
ENSVPAP00000004982
annotation not available
   
 0.655
ENSVPAP00000003810
annotation not available
    
 0.648
UBAC2
UBA domain containing 2.
   
  
 0.640
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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