Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MYO1DMyosin ID. (953 aa)    
Predicted Functional Partners:
ENSVPAP00000010886
annotation not available
   
 
 0.943
MYO1B
Myosin IB.
   
   0.852
BAZ1B
Bromodomain adjacent to zinc finger domain 1B.
    
  0.731
CALM1
Calmodulin 2.
    
 0.720
CALM2
Calmodulin 2.
    
 0.720
EFCAB3
EF-hand calcium binding domain 3.
    
 0.705
ENSVPAP00000010169
annotation not available
      
 0.685
POLR1E
RNA polymerase I subunit E.
    
  0.670
ADPRM
ADP-ribose/CDP-alcohol diphosphatase, manganese dependent.
      
 0.669
ACTR10
Actin related protein 10.
    
 0.659
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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