Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FBXO4F-box protein 4. (387 aa)    
Predicted Functional Partners:
CUL1
Cullin 1.
    
 0.992
SKP1
S-phase kinase associated protein 1.
    
 0.985
TERF1
Telomeric repeat binding factor 1.
    
 
 0.974
FBXW7
F-box and WD repeat domain containing 7.
    
 0.959
SKP2
S-phase kinase associated protein 2.
     
 0.957
BTRC
Beta-transducin repeat containing E3 ubiquitin protein ligase.
     
 0.923
FBXW11
F-box and WD repeat domain containing 11.
     
 0.908
RBX1
Ring-box 1.
    
 0.900
FXR1
FMR1 autosomal homolog 1.
    
 
 0.841
FBXO9
F-box protein 9.
    
 
 0.828
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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