Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
VWA8Von Willebrand factor A domain containing 8. (1849 aa)    
Predicted Functional Partners:
NUDT12
Nudix hydrolase 12.
    
 0.878
FOXA1
Forkhead box A1.
    
   0.774
ENSVPAP00000005173
annotation not available
    
 
 0.748
TRMT61B
tRNA methyltransferase 61B.
      
 0.728
MFSD6
Major facilitator superfamily domain containing 6.
      
 0.724
PPP1R12A
Protein phosphatase 1 regulatory subunit 12A.
    
 0.708
NUP205
Nucleoporin 205.
     
 0.690
NEK10
NIMA related kinase 10.
    
 0.667
WBP4
WW domain binding protein 4.
      
 0.663
FANCM
FA complementation group M.
    
 0.663
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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