STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DUS2Dihydrouridine synthase 2. (491 aa)    
Predicted Functional Partners:
EPRS1
glutamyl-prolyl-tRNA synthetase 1.
  
 
 0.987
EIF2AK2
Eukaryotic translation initiation factor 2 alpha kinase 2.
    
 0.957
THUMPD1
THUMP domain containing 1.
  
 
 0.903
TRMT1L
tRNA methyltransferase 1 like.
   
 
 0.888
ENSVPAP00000005367
annotation not available
      
 0.845
EIF2AK3
Eukaryotic translation initiation factor 2 alpha kinase 3.
    
  0.826
PAXBP1
PAX3 and PAX7 binding protein 1.
      
 0.823
DTWD1
DTW domain containing 1.
      
 0.822
DTWD2
DTW domain containing 2.
      
 0.811
DIMT1
DIMT1 rRNA methyltransferase and ribosome maturation factor.
  
  
 0.800
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.