Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
B4GAT1Beta-1,4-glucuronyltransferase 1. (410 aa)    
Predicted Functional Partners:
RXYLT1
Ribitol xylosyltransferase 1.
     
 0.990
ENSVPAP00000010281
annotation not available
    
 0.969
ENSVPAP00000002882
annotation not available
    
 0.940
FKTN
Fukutin.
    
 
 0.924
B3GALNT2
beta-1,3-N-acetylgalactosaminyltransferase 2.
     
 0.905
ADGRL2
Adhesion G protein-coupled receptor L2.
    
   0.812
POMT2
Protein O-mannosyltransferase 2.
    
 
 0.804
CRPPA
CDP-L-ribitol pyrophosphorylase A.
      
 0.769
DPM1
Dolichyl-phosphate mannosyltransferase subunit 1, catalytic.
      
 0.713
DPM3
Dolichyl-phosphate mannosyltransferase subunit 3, regulatory.
      
 0.692
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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