Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EPB41L5Erythrocyte membrane protein band 4.1 like 5. (669 aa)    
Predicted Functional Partners:
CHD9
Chromodomain helicase DNA binding protein 9.
    
   0.797
ENSVPAP00000002707
annotation not available
    
 
 0.797
MIB1
Mindbomb E3 ubiquitin protein ligase 1.
    
 
 0.789
RPL3
Ribosomal protein L3.
    
   0.782
SMC1B
Structural maintenance of chromosomes 1B.
      
 0.769
MPP5
Membrane palmitoylated protein 5.
    
 0.764
CASK
Calcium/calmodulin dependent serine protein kinase.
   
 0.709
RALB
RAS like proto-oncogene B.
    
 
 0.647
BRD2
Bromodomain containing 2.
    
   0.632
MYC
MYC proto-oncogene, bHLH transcription factor.
    
 
 0.626
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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