Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000002402annotation not available (449 aa)    
Predicted Functional Partners:
UFL1
UFM1 specific ligase 1.
   
 
 0.997
DDRGK1
DDRGK domain containing 1.
   
 
 0.986
UFM1
Ubiquitin fold modifier 1.
    
 
 0.976
LTN1
Listerin E3 ubiquitin protein ligase 1.
    
 
 0.877
ENSVPAP00000002751
annotation not available
    
 
 0.815
NEMF
Nuclear export mediator factor.
    
 
 0.784
EIF6
Eukaryotic translation initiation factor 6.
    
 
 0.776
RPL6
Ribosomal protein L6.
    
 
 0.774
HSPA4
Heat shock protein family A (Hsp70) member 4.
    
   0.774
MDM2
MDM2 proto-oncogene.
    
 
 0.774
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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