Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TEFTEF transcription factor, PAR bZIP family member. (213 aa)    
Predicted Functional Partners:
COX5A
Cytochrome c oxidase subunit 5A.
   
 0.910
COX5B
Cytochrome c oxidase subunit 5B.
   
 0.896
COX7C
Cytochrome c oxidase subunit 7C.
   
 0.890
COX4I1
Cytochrome c oxidase subunit 4 isoform 1, mitochondrial.
   
 0.887
COA6
Cytochrome c oxidase assembly factor 6.
   
 0.884
COX2
Cytochrome c oxidase subunit II.
    
  0.845
COX6A1
Cytochrome c oxidase subunit 6A1.
   
 0.844
COX6A2
Cytochrome c oxidase subunit 6A2.
   
 0.844
NR1D2
Nuclear receptor subfamily 1 group D member 2.
   
 0.767
COX3
Cytochrome c oxidase subunit III.
    
  0.762
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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