Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000002462annotation not available (109 aa)    
Predicted Functional Partners:
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
    
 0.790
PPP3CB
Protein phosphatase 3 catalytic subunit beta.
    
 0.781
PPP3CC
Protein phosphatase 3 catalytic subunit gamma.
    
 0.781
PPP3CA
Protein phosphatase 3 catalytic subunit alpha.
    
 0.781
TSSK4
Testis specific serine kinase 4.
    
 0.766
ENSVPAP00000005725
annotation not available
    
 
 0.713
RCAN2
Regulator of calcineurin 2.
    
 
 0.662
RCAN3
RCAN family member 3.
    
 
 0.662
ENSVPAP00000009582
annotation not available
   
 
 0.654
CASK
Calcium/calmodulin dependent serine protein kinase.
    
 0.647
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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