Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ARMCX1Armadillo repeat containing X-linked 1. (265 aa)    
Predicted Functional Partners:
PPARD
Peroxisome proliferator activated receptor delta.
    
   0.934
SPTAN1
Spectrin alpha, non-erythrocytic 1.
    
 0.624
ENSVPAP00000004169
annotation not available
   
 0.600
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
   
 0.590
RANBP2
RAN binding protein 2.
    
 0.583
GPSM2
G protein signaling modulator 2.
    
 
 0.569
PLS3
Plastin 3.
    
 
 0.547
KIF5C
Kinesin family member 5C.
    
 
 0.540
INSC
INSC spindle orientation adaptor protein.
    
 
 0.536
PDK3
Pyruvate dehydrogenase kinase 3.
   
 
 0.533
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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