Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CHST9Carbohydrate sulfotransferase 9. (443 aa)    
Predicted Functional Partners:
TMED2
Transmembrane p24 trafficking protein 2.
    
   0.826
ENSVPAP00000006965
annotation not available
    
 
 0.802
ENSVPAP00000001452
annotation not available
      
 0.739
CLIP4
CAP-Gly domain containing linker protein family member 4.
      
 0.722
PHKB
Phosphorylase kinase regulatory subunit beta.
      
 0.711
ENSVPAP00000010522
annotation not available
      
 0.690
ENSVPAP00000004922
annotation not available
      
 0.680
ENSVPAP00000009699
annotation not available
    
 0.661
ACBD4
acyl-CoA binding domain containing 4.
      
 0.657
ACBD5
acyl-CoA binding domain containing 5.
      
 0.657
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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