Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HECW2HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2. (1537 aa)    
Predicted Functional Partners:
RPS27A
Ribosomal protein S27a.
    
  0.782
ENSVPAP00000003920
annotation not available
    
 0.776
WBP2NL
WBP2 N-terminal like.
    
 
 0.766
GJA1
Gap junction protein alpha 1.
    
  0.763
ENSVPAP00000005903
annotation not available
    
 0.725
PSMA2
Proteasome 20S subunit alpha 2.
    
 0.713
UBE2K
Ubiquitin conjugating enzyme E2 K.
    
 0.700
ENSVPAP00000002405
annotation not available
    
 0.696
SGK1
Serum/glucocorticoid regulated kinase 1.
    
 0.696
LATS1
Large tumor suppressor kinase 1.
   
 0.689
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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