Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000002516annotation not available (164 aa)    
Predicted Functional Partners:
CDK9
Cyclin dependent kinase 9.
   
 0.868
CDK12
Cyclin dependent kinase 12.
    
 0.800
CDK13
Cyclin dependent kinase 13.
    
 0.800
STX8
Syntaxin 8.
    
 
 0.794
NCBP1
Nuclear cap binding protein subunit 1.
    
  0.732
SUPT4H1
SPT4 homolog, DSIF elongation factor subunit.
    
 0.727
TMEM9B
TMEM9 domain family member B.
   
  
 0.684
DPY19L4
Dpy-19 like 4.
      
 0.674
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.673
ENSVPAP00000002019
annotation not available
      
 0.672
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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