MPP7 protein (Vicugna pacos) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

MPP7

Membrane palmitoylated protein 7. (554 aa)

Predicted Functional Partners:

LIN7C

0.954

PATJ

0.877

LIN7A

0.874

MPP5

0.797

PARD6B

0.775

PARD6G

0.775

EOGT

0.765

ENSVPAP00000008126

0.740

ENSVPAP00000004124

0.722

PARD3B

0.722

Your Current Organism:

Vicugna pacos

NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSVPAP00000004124	MPP5	ENSVPAP00000004124	ENSVPAP00000005290	annotation not available	Membrane palmitoylated protein 5.	0.901
ENSVPAP00000004124	MPP7	ENSVPAP00000004124	ENSVPAP00000002529	annotation not available	Membrane palmitoylated protein 7.	0.722
ENSVPAP00000004124	PARD6B	ENSVPAP00000004124	ENSVPAP00000003680	annotation not available	Par-6 family cell polarity regulator beta.	0.968
ENSVPAP00000004124	PARD6G	ENSVPAP00000004124	ENSVPAP00000007402	annotation not available	Par-6 family cell polarity regulator gamma.	0.967
ENSVPAP00000004124	PATJ	ENSVPAP00000004124	ENSVPAP00000003771	annotation not available	PATJ crumbs cell polarity complex component.	0.675
ENSVPAP00000008126	LIN7A	ENSVPAP00000008126	ENSVPAP00000001781	annotation not available	Lin-7 homolog A, crumbs cell polarity complex component.	0.895
ENSVPAP00000008126	LIN7C	ENSVPAP00000008126	ENSVPAP00000004822	annotation not available	Lin-7 homolog C, crumbs cell polarity complex component.	0.895
ENSVPAP00000008126	MPP5	ENSVPAP00000008126	ENSVPAP00000005290	annotation not available	Membrane palmitoylated protein 5.	0.740
ENSVPAP00000008126	MPP7	ENSVPAP00000008126	ENSVPAP00000002529	annotation not available	Membrane palmitoylated protein 7.	0.740
EOGT	MPP5	ENSVPAP00000001247	ENSVPAP00000005290	EGF domain specific O-linked N-acetylglucosamine transferase.	Membrane palmitoylated protein 5.	0.654
EOGT	MPP7	ENSVPAP00000001247	ENSVPAP00000002529	EGF domain specific O-linked N-acetylglucosamine transferase.	Membrane palmitoylated protein 7.	0.765
LIN7A	ENSVPAP00000008126	ENSVPAP00000001781	ENSVPAP00000008126	Lin-7 homolog A, crumbs cell polarity complex component.	annotation not available	0.895
LIN7A	LIN7C	ENSVPAP00000001781	ENSVPAP00000004822	Lin-7 homolog A, crumbs cell polarity complex component.	Lin-7 homolog C, crumbs cell polarity complex component.	0.909
LIN7A	MPP5	ENSVPAP00000001781	ENSVPAP00000005290	Lin-7 homolog A, crumbs cell polarity complex component.	Membrane palmitoylated protein 5.	0.992
LIN7A	MPP7	ENSVPAP00000001781	ENSVPAP00000002529	Lin-7 homolog A, crumbs cell polarity complex component.	Membrane palmitoylated protein 7.	0.874
LIN7A	PATJ	ENSVPAP00000001781	ENSVPAP00000003771	Lin-7 homolog A, crumbs cell polarity complex component.	PATJ crumbs cell polarity complex component.	0.593
LIN7C	ENSVPAP00000008126	ENSVPAP00000004822	ENSVPAP00000008126	Lin-7 homolog C, crumbs cell polarity complex component.	annotation not available	0.895
LIN7C	LIN7A	ENSVPAP00000004822	ENSVPAP00000001781	Lin-7 homolog C, crumbs cell polarity complex component.	Lin-7 homolog A, crumbs cell polarity complex component.	0.909
LIN7C	MPP5	ENSVPAP00000004822	ENSVPAP00000005290	Lin-7 homolog C, crumbs cell polarity complex component.	Membrane palmitoylated protein 5.	0.967
LIN7C	MPP7	ENSVPAP00000004822	ENSVPAP00000002529	Lin-7 homolog C, crumbs cell polarity complex component.	Membrane palmitoylated protein 7.	0.954