Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GCC2GRIP and coiled-coil domain containing 2. (1510 aa)    
Predicted Functional Partners:
RAB6A
RAB6A, member RAS oncogene family.
    
 0.962
NUP93
Nucleoporin 93.
   
 0.949
NUP155
Nucleoporin 155.
   
 0.941
NUP153
Nucleoporin 153.
   
 0.940
ARL1
ADP ribosylation factor like GTPase 1.
   
 0.937
NUP54
Nucleoporin 54.
   
 0.934
NUP133
Nucleoporin 133.
   
 0.932
NUP85
Nucleoporin 85.
    
 0.932
NUP107
Nucleoporin 107.
   
 0.928
KPNB1
Karyopherin subunit beta 1.
   
 0.918
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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