Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000002552annotation not available (861 aa)    
Predicted Functional Partners:
YES1
YES proto-oncogene 1, Src family tyrosine kinase.
   
 0.989
LPXN
Leupaxin.
    
 0.987
GRB2
Growth factor receptor bound protein 2.
   
 0.980
SOS1
SOS Ras/Rac guanine nucleotide exchange factor 1.
    
 0.961
NEDD9
Neural precursor cell expressed, developmentally down-regulated 9.
   
 0.956
ITGAV
Integrin subunit alpha V.
    
 0.933
ENSVPAP00000007393
annotation not available
    
 0.930
CBL
Cbl proto-oncogene.
    
 
 0.930
CRK
CRK proto-oncogene, adaptor protein.
    
 0.926
ENSVPAP00000010337
annotation not available
    
 0.926
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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